DISEASE PROGRAM 02 • INFECTIOUS PULMONOLOGY & MDR-TB

Tuberculosis (TB) In-Silico Testing Arm

India carries 27% of the global tuberculosis burden and the world's highest count of multi-drug resistant (MDR/XDR-TB) cases. Traditional clinical trials face severe recruitment bottlenecks, prolonged 18–24 month regimens, and ethical barriers on physical control arms. Silicon Arm models bactericidal kill-curves and virtual control cohorts in-silico to accelerate curative regimens.

THE CLINICAL PROBLEM IN INDIA

Physical Trial Deficits & Ethical Control Barriers

Despite carrying over 2.8 million active cases annually, India hosts under 3% of global clinical trials for novel chemical entities (NCEs). Traditional Phase II/III regimens require 18–24 months of physical monitoring, resulting in severe patient loss to follow-up.

Assigning MDR-TB patients with extensive resistance profiles to failing standard-of-care physical control arms creates severe ethical barriers and clinical trial attrition.

Trial Deficit Reality: Average time required to complete physical Phase III MDR-TB trial in India: 4.8 Years with up to 35% loss-to-follow-up.
IN-SILICO PLATFORM SOLUTION

Virtual Cohort Simulation for Regimen Optimization

Silicon Arm is calibrating virtual TB cohorts matching Indian cavitary status, sputum smear grades, nutritional baselines (BMI < 18.5), and pharmacokinetic penetration into fibrotic lung lesions.

  • Synthetic Control Arms: Cuts physical control arm enrollment requirements by up to 50%, drastically de-risking IRB approval.
  • Bactericidal Kill-Curves: Simulating Early Bactericidal Activity (EBA 0–14d) and long-term sterilization kinetics across novel combination regimens.
  • 5-State Cavitary Disease Model: Predicting cavity closure timelines, sputum culture conversion, and 2-year post-treatment relapse risk.
  • MDR Resistance Mutational Dynamics: Modeling the emergence of secondary resistance under sub-inhibitory tissue concentrations.
🫁

Cavitary Lesion Pharmacokinetics

Mathematical modeling of drug permeability gradients through necrotic caseum, cellular granuloma rims, and fibrotic vascular beds to ensure lethal Cmin/MIC ratios.

📉

Multi-Strain In-Silico Cohorts

Generating 10,000+ virtual pulmonary TB patients incorporating local Indian Beijing/Central Asian strain genotypes and baseline isoniazid/rifampicin resistance variations.

⏱️

Regimen Duration Compression

Simulate whether novel 6-month short-course regimens (such as BPaL/BPaMZ) achieve non-inferior sterilizing efficacy compared to standard 18-month regimens before dosing the first patient.

🛡️

Regulatory Dossier Preparation

Generating mathematically validated Bayesian survival priors ready for submission in CDSCO, ICMR, and ethics committee protocol justifications.

INTERACTIVE PROJECTION

TB Regimen Simulation & Sputum Conversion Model

Explore simulated bactericidal trajectories and 24-month relapse risk across standard of care vs. novel in-silico simulated regimens.

Culture Conversion at Month 2
88.4%
Accelerated bactericidal clearance
End-of-Treatment Cure Rate
92.6%
Simulated across 5,000 virtual subjects
2-Year Relapse Probability
3.4%
Low cavitary residual burden
Physical Control Arm Cut
-50%
Replaced by virtual matched cohort
Regimen Profile: Bedaquiline + Pretomanid + Linezolid (BPaL)
In-silico simulation demonstrates rapid bactericidal kill within day 0–14 followed by sterilizing clearance of semi-dormant bacilli in necrotic cavitary rims. Achieves non-inferior clinical cure in 6 months vs. historical 18-month control regimens while eliminating 250+ physical control arm exposures.

Collaborate on TB Regimen Simulation

Biotechnology innovators, clinical research organizations, and pulmonology trialists evaluating next-generation anti-tubercular compounds can register for collaborative trial protocol simulation or email pabi@silico-arm.in.